mpi-tutorial
1.5 day MPI tutorial for those with some C/Fortran knowledge.
Computing at scale for hard research problems
1.5 day MPI tutorial for those with some C/Fortran knowledge.
A simple Partial Order Aligner based on Lee, Grasso and Sharlow (2002), for education/demonstration purposes
Short tour of parallel and foreach packages, and how to think about scaling data analyses
Simple coarray examples for teaching
Half-day Parallel I/O tutorial for HPC - MPI-IO, HDF5, NetCDF
Machine Learning for Scientists Tutorial
Python package and routines for merging VCF files
Presentation for EuroMPI 2016
Simple test cases comparing julia and chapel
Repo for 2025 summer school
Rosalind exercises in chapel
Simple demonstration of using spatial indexes (here kd-trees) to approximately map nanopore squiggle reads