Developer profile

Jonathan Dursi

@ljdursi on GitHub ↗

@NVIDIA · Toronto

Possibly Available

About

Computing at scale for hard research problems

Repositories

mpi-tutorial

1.5 day MPI tutorial for those with some C/Fortran knowledge.

C★ 98⑂ 17

poapy

A simple Partial Order Aligner based on Lee, Grasso and Sharlow (2002), for education/demonstration purposes

Python★ 77⑂ 12

beyond-single-core-R

Short tour of parallel and foreach packages, and how to think about scaling data analyses

R★ 75⑂ 12

mergevcf

Python package and routines for merging VCF files

Python★ 29⑂ 11

EuroMPI2016

Presentation for EuroMPI 2016

Shell★ 11⑂ 0

julia_v_chapel

Simple test cases comparing julia and chapel

Chapel★ 7⑂ 2

simple-squiggle-pseudomapper

Simple demonstration of using spatial indexes (here kd-trees) to approximately map nanopore squiggle reads

Python★ 4⑂ 0